STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG44050.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)    
Predicted Functional Partners:
nuoB
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
 
 0.999
APG44052.1
NAD(P)-dependent iron-only hydrogenase diaphorase iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
APG44231.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
APG43500.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
APG43943.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
APG45328.1
NAD(P)-dependent iron-only hydrogenase diaphorase iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.992
APG45170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.992
APG43909.1
NADH:ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
nuoH
NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
  
 0.991
APG44049.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
Your Current Organism:
Pelobacter acetylenicus
NCBI taxonomy Id: 29542
Other names: DSM 3246, NBRC 103808, P. acetylenicus, strain WoAcy 1
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