Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG42956.1 | APG43109.1 | A6070_01510 | A6070_02415 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APG42956.1 | APG43110.1 | A6070_01510 | A6070_02420 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | 0.996 |
| APG42956.1 | APG43169.1 | A6070_01510 | A6070_02750 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APG42956.1 | APG43170.1 | A6070_01510 | A6070_02755 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APG42956.1 | APG44729.1 | A6070_01510 | A6070_11815 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APG42956.1 | APG44730.1 | A6070_01510 | A6070_11820 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APG42956.1 | APG44797.1 | A6070_01510 | A6070_12205 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APG42956.1 | carA | A6070_01510 | A6070_07195 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. | 0.925 |
| APG43109.1 | APG42956.1 | A6070_02415 | A6070_01510 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APG43109.1 | APG43110.1 | A6070_02415 | A6070_02420 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | 0.998 |
| APG43109.1 | APG43169.1 | A6070_02415 | A6070_02750 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
| APG43109.1 | APG43170.1 | A6070_02415 | A6070_02755 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| APG43109.1 | APG44729.1 | A6070_02415 | A6070_11815 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
| APG43109.1 | APG44730.1 | A6070_02415 | A6070_11820 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
| APG43109.1 | APG44797.1 | A6070_02415 | A6070_12205 | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
| APG43110.1 | APG42956.1 | A6070_02420 | A6070_01510 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| APG43110.1 | APG43109.1 | A6070_02420 | A6070_02415 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APG43110.1 | APG43169.1 | A6070_02420 | A6070_02750 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.912 |
| APG43110.1 | APG43170.1 | A6070_02420 | A6070_02755 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APG43110.1 | APG44729.1 | A6070_02420 | A6070_11815 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.912 |
page 1 of 5