STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP39414.1Predicted transmembrane protein. (570 aa)    
Predicted Functional Partners:
potC
COG1176 ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; COG1177 ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].
  
 
 0.980
potB
COG1176 ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; COG1177 ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].
  
 
 0.978
potA
Spermidine/putrescine ABC transporter ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.975
BAP39410.1
Predicted transmembrane protein.
 
  
 
0.973
era
GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.790
lolE
COG4591 ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].
 
   
 0.788
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.781
BAP39543.1
Hypothetical protein; COG1284 Uncharacterized conserved protein [Function unknown]; putative transmembrane protein.
 
    0.780
BAP39465.1
Hypothetical protein; COG1284 Uncharacterized conserved protein [Function unknown]; putative transmembrane protein.
 
    0.778
norM
Hypothetical protein; COG0534 Na+-driven multidrug efflux pump [Defense mechanisms]; predicted transmembrane protein, putative MatE family efflux protein.
 
     0.776
Your Current Organism:
Mycoplasma canadense
NCBI taxonomy Id: 29554
Other names: ATCC 29418, M. canadense, Metamycoplasma canadense, NCTC 10152, strain 275C
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