STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDCOG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Belongs to the ABC transporter superfamily. (410 aa)    
Predicted Functional Partners:
oppC
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; permease protein.
 
 0.999
oppB
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; permease protein.
 0.998
appF
Oligopeptide transport ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]; COG4608 ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]; Belongs to the ABC transporter superfamily.
 
 
0.997
dppC
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; permease protein.
 
 
 0.991
dppB
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; permease protein.
  
 0.961
fecE
Alkylphosphonate ABC transporter; ATP-binding protein; COG0194 Guanylate kinase [Nucleotide transport and metabolism]; COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].
 
    
0.904
cbiO2
Cobalt import ATP-binding protein CbiO2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     
0.900
potA
Spermidine/putrescine ABC transporter ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.899
oppA
Oligopeptide ABC transporter substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism].
  
    0.761
BAP39556.1
Predicted transmembrane protein.
       0.507
Your Current Organism:
Mycoplasma canadense
NCBI taxonomy Id: 29554
Other names: ATCC 29418, M. canadense, Metamycoplasma canadense, NCTC 10152, strain 275C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.