STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP39651.1ABC transporter ATP-binding protein; COG1118 ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]; COG3839 ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]; Belongs to the ABC transporter superfamily. (650 aa)    
Predicted Functional Partners:
ugpA
COG1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]; COG1177 ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].
 
 
 0.999
ugpE
COG0395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; COG3833 ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism].
 
 
 0.999
BAP39649.1
Pfam03202 Lipoprotein_10, putative mycoplasma lipoprotein, C-terminal region; pfam03305 Lipoprotein_X, Mycoplasma MG185/MG260 protein. Most of the aligned regions in this family are found towards the middle of the member proteins.; predicted lipoprotein.
 
  
 0.889
snc-2
Hypothetical protein; COG1525 Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair]; predicted lipoprotein.
     
 0.800
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
   0.632
BAP39504.1
Alkylphosphonate ABC transporter; Pfam06646 Mycoplasma_p37, High affinity transport system protein p37. This family consists of several high affinity transport system protein p37 sequences which are specific to Mycoplasma species. The p37 gene is part of an operon encoding two additional proteins which are highly similar to components of the periplasmic binding-protein-dependent transport systems of Gram-negative bacteria.It has been suggested that p37 is part of a homologous, high-affinity transport system in M. hyorhinis, a Gram-positive bacterium; substrate-binding component.
  
     0.626
BAP39410.1
Predicted transmembrane protein.
 
   
 0.506
amyA
Glucan 1,6-alpha-glucosidase; COG0366 Glycosidases [Carbohydrate transport and metabolism].
 
  
 0.483
lolE
COG4591 ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].
 
   
 0.468
secA
Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
     
 0.452
Your Current Organism:
Mycoplasma canadense
NCBI taxonomy Id: 29554
Other names: ATCC 29418, M. canadense, Metamycoplasma canadense, NCTC 10152, strain 275C
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