STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP39771.1Hypothetical protein. (725 aa)    
Predicted Functional Partners:
BAP39649.1
Pfam03202 Lipoprotein_10, putative mycoplasma lipoprotein, C-terminal region; pfam03305 Lipoprotein_X, Mycoplasma MG185/MG260 protein. Most of the aligned regions in this family are found towards the middle of the member proteins.; predicted lipoprotein.
 
   0.893
oppA
Oligopeptide ABC transporter substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism].
 
    0.784
lolE
COG4591 ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].
 
    0.782
rbgA
Putative GTP binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.781
secDF
Protein-export membrane protein; PRK13024 bifunctional preprotein translocase subunit SecD/SecF.
 
     0.777
spoU-2
tRNA/rRNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.777
BAP39410.1
Predicted transmembrane protein.
 
     0.775
BAP39517.1
Membrane protein P80.
  
     0.775
BAP39414.1
Predicted transmembrane protein.
 
     0.774
BAP39593.1
Hypothetical protein; Pfam11074; DUF2779; Domain of unknown function(DUF2779); This domain is conserved in bacteria. The function is not known; predicted DUF2779 family.
  
     0.772
Your Current Organism:
Mycoplasma canadense
NCBI taxonomy Id: 29554
Other names: ATCC 29418, M. canadense, Metamycoplasma canadense, NCTC 10152, strain 275C
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