Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKF41205.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)    
Predicted Functional Partners:
AKF41060.1
Metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.736
AKF41494.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
AKF41361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.649
AKF40882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
AKF40883.1
ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
 
     0.514
AKF41125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.502
AKF41123.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
     0.426
AKF41065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.401
Your Current Organism:
Mycoplasma canis
NCBI taxonomy Id: 29555
Other names: ATCC 19525, Asterococcus canis, IFO 14846, M. canis, Mycoplasmopsis canis, NBRC 14846, NCTC 10146, strain PG 14, strain PG14, strain beta
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