STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF41206.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)    
Predicted Functional Partners:
AKF41208.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
AKF41207.1
Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.982
AKF41192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
     0.602
AKF41125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
AKF41361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.537
AKF41494.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
AKF41228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
AKF41050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
AKF41214.1
DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.464
Your Current Organism:
Mycoplasma canis
NCBI taxonomy Id: 29555
Other names: ATCC 19525, Asterococcus canis, IFO 14846, M. canis, Mycoplasmopsis canis, NBRC 14846, NCTC 10146, strain PG 14, strain PG14, strain beta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.