STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA49789.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
pepA_3
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AKA49784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
MCYN0163
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.
       0.773
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.773
dinP
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
nifU
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
csd
Aminotransferase class V; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
nusB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AKA50223.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
ktrA
Potassium transporter KtrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
Your Current Organism:
Mycoplasma gallinaceum
NCBI taxonomy Id: 29556
Other names: ATCC 33550, M. gallinaceum, NCTC 10183, strain DD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.