STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspLipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (222 aa)    
Predicted Functional Partners:
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
   
 0.950
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
  
 0.878
OAB48815.1
Putative spermidine/putrescine substrate binding protein.
  
     0.774
OAB48820.1
Putative spermidine/putrescine substrate binding protein.
  
     0.774
OAB49203.1
Hypothetical protein.
  
     0.763
OAB49202.1
Hypothetical protein.
  
    0.760
OAB48898.1
Substrate-specific component FolT of folate ECF transporter.
  
     0.752
OAB48715.1
Hypothetical protein.
 
     0.740
OAB49127.1
Hypothetical protein.
 
     0.724
OAB49195.1
Membrane lipoprotein P80.
 
   
 0.713
Your Current Organism:
Mycoplasma gallinarum
NCBI taxonomy Id: 29557
Other names: ATCC 19708, Asterococcus gallinarum, Borrelomyces gallinarum, DSM 19816, IFO 14859, M. gallinarum, NBRC 14859, NCTC 10120, strain PG16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.