Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OAB48825.1 | OAB48851.1 | MGALLINA_03960 | MGALLINA_04220 | Hydrolase (HAD superfamily). | COF family HAD hydrolase protein. | 0.535 |
| OAB48825.1 | ribF | MGALLINA_03960 | MGALLINA_01260 | Hydrolase (HAD superfamily). | Riboflavin kinase / FMN adenylyltransferase. | 0.492 |
| OAB48851.1 | OAB48825.1 | MGALLINA_04220 | MGALLINA_03960 | COF family HAD hydrolase protein. | Hydrolase (HAD superfamily). | 0.535 |
| OAB48851.1 | ribF | MGALLINA_04220 | MGALLINA_01260 | COF family HAD hydrolase protein. | Riboflavin kinase / FMN adenylyltransferase. | 0.522 |
| OAB48851.1 | rpsO | MGALLINA_04220 | MGALLINA_03080 | COF family HAD hydrolase protein. | SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.402 |
| OAB48851.1 | truB | MGALLINA_04220 | MGALLINA_04230 | COF family HAD hydrolase protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.830 |
| OAB48951.1 | polA | MGALLINA_02830 | MGALLINA_00640 | Dephospho-CoA kinase. | DNA polymerase I. | 0.850 |
| OAB48951.1 | ribF | MGALLINA_02830 | MGALLINA_01260 | Dephospho-CoA kinase. | Riboflavin kinase / FMN adenylyltransferase. | 0.486 |
| OAB48951.1 | secD | MGALLINA_02830 | MGALLINA_01270 | Dephospho-CoA kinase. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.477 |
| polA | OAB48951.1 | MGALLINA_00640 | MGALLINA_02830 | DNA polymerase I. | Dephospho-CoA kinase. | 0.850 |
| polA | prs | MGALLINA_00640 | MGALLINA_04770 | DNA polymerase I. | Ribose-phosphate pyrophosphokinase. | 0.782 |
| polA | ribF | MGALLINA_00640 | MGALLINA_01260 | DNA polymerase I. | Riboflavin kinase / FMN adenylyltransferase. | 0.427 |
| polA | secD | MGALLINA_00640 | MGALLINA_01270 | DNA polymerase I. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.778 |
| polA | topA | MGALLINA_00640 | MGALLINA_04370 | DNA polymerase I. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.969 |
| polA | truB | MGALLINA_00640 | MGALLINA_04230 | DNA polymerase I. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.680 |
| prs | polA | MGALLINA_04770 | MGALLINA_00640 | Ribose-phosphate pyrophosphokinase. | DNA polymerase I. | 0.782 |
| prs | ribF | MGALLINA_04770 | MGALLINA_01260 | Ribose-phosphate pyrophosphokinase. | Riboflavin kinase / FMN adenylyltransferase. | 0.479 |
| prs | rpsO | MGALLINA_04770 | MGALLINA_03080 | Ribose-phosphate pyrophosphokinase. | SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.444 |
| prs | secD | MGALLINA_04770 | MGALLINA_01270 | Ribose-phosphate pyrophosphokinase. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.489 |
| prs | topA | MGALLINA_04770 | MGALLINA_04370 | Ribose-phosphate pyrophosphokinase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.588 |
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