STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppB-2Oligopeptide transport system permease protein OppB. (362 aa)    
Predicted Functional Partners:
oppA
Oligopeptide ABC transporter, periplasmicoligopeptide-binding protein OppA.
 
 
 0.997
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 0.991
oppF
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.991
oppC
Oligopeptide transport system permease protein OppC.
 
 
 0.985
OAB49205.1
Oligopeptide transport system; Belongs to the ABC transporter superfamily.
 0.980
OAB49204.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.945
OAB48984.1
Oligopeptide transport system permease protein OppC.
  
 
  0.932
oppB
Oligopeptide transport system permease protein OppB.
 
  
 
0.929
OAB49038.1
Hypothetical protein.
       0.806
OAB48970.1
Hypothetical protein.
  
 
  0.727
Your Current Organism:
Mycoplasma gallinarum
NCBI taxonomy Id: 29557
Other names: ATCC 19708, Asterococcus gallinarum, Borrelomyces gallinarum, DSM 19816, IFO 14859, M. gallinarum, NBRC 14859, NCTC 10120, strain PG16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.