STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDE42765.1Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)    
Predicted Functional Partners:
KDE41695.1
methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.587
KDE42764.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
KDE42170.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.422
KDE42718.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.411
KDE42763.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.409
Your Current Organism:
Mycoplasma hyosynoviae
NCBI taxonomy Id: 29559
Other names: ATCC 25591, M. hyosynoviae, Metamycoplasma hyosynoviae, Mycoplasma suidaniae, NCTC 10167, strain S-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.