STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrA-2Chromate transport protein. (228 aa)    
Predicted Functional Partners:
chrA
Chromate transport protein.
 
     0.939
OAD18368.1
Hypothetical protein.
  
     0.763
OAD18343.1
Phosphotransferase system PTS.
  
     0.755
OAD18317.1
DNA polymerase III delta subunit.
  
     0.678
OAD18085.1
Hypothetical protein.
 
     0.604
OAD18542.1
ABC transporter, permease component.
 
     0.545
OAD18523.1
Hypothetical protein.
  
     0.482
atpB
ATP synthase A chain.
 
     0.465
OAD18146.1
Hypothetical protein.
  
    0.437
atpC
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.433
Your Current Organism:
Mycoplasma meleagridis
NCBI taxonomy Id: 29561
Other names: ATCC 25294, CIP 103833, DSM 22145, IFO 14852, M. meleagridis, NBRC 14852, NCTC 10153
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