STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDSelenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. (329 aa)    
Predicted Functional Partners:
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.994
SFL19726.1
Cysteine desulfurase family protein.
  
 0.954
SFL19706.1
Selenocysteine-specific elongation factor.
 
   
 0.934
SFL19553.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
   
 0.884
SFL50515.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 0.843
SFL36293.1
tRNA 2-selenouridine synthase.
 
   
 0.842
SFL11971.1
Thioredoxin reductase (NADPH).
     
 0.829
SFL70682.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
    
 0.826
SFL62843.1
Thioredoxin reductase (NADPH).
     
 0.821
SFL27064.1
Cysteine desulfurase.
   
 0.814
Your Current Organism:
Halanaerobium salsuginis
NCBI taxonomy Id: 29563
Other names: ATCC 51327, H. salsuginis, Haloanaerobium salsuginis, Haloanaerobium salsugo, strain VS-752
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