STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL28774.1Heavy metal sensor kinase. (476 aa)    
Predicted Functional Partners:
SFL28755.1
Two component transcriptional regulator, winged helix family.
 0.973
SFM04213.1
PAS domain S-box-containing protein.
 
 0.952
SFL70682.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.944
SFL63289.1
PAS domain S-box-containing protein.
   
 0.911
SFL40507.1
PAS domain S-box-containing protein.
  
 0.900
SFL80332.1
Response regulator receiver domain-containing protein.
 
 0.887
SFL35638.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.886
SFM08349.1
Two component transcriptional regulator, winged helix family.
 0.886
SFL12803.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.885
SFL50260.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.885
Your Current Organism:
Halanaerobium salsuginis
NCBI taxonomy Id: 29563
Other names: ATCC 51327, H. salsuginis, Haloanaerobium salsuginis, Haloanaerobium salsugo, strain VS-752
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.