STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL35457.1Alkaline phosphatase; Belongs to the alkaline phosphatase family. (483 aa)    
Predicted Functional Partners:
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 
 0.895
SFL35477.1
Uncharacterized membrane protein.
 
     0.882
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
    
 
 0.882
SFM00418.1
Ankyrin repeat-containing protein.
   
 0.791
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.740
SFL50220.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
 
  
 0.677
SFL98015.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.606
SFL20043.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.589
SFL57057.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.589
SFL14812.1
DNA processing protein.
  
    0.583
Your Current Organism:
Halanaerobium salsuginis
NCBI taxonomy Id: 29563
Other names: ATCC 51327, H. salsuginis, Haloanaerobium salsuginis, Haloanaerobium salsugo, strain VS-752
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.