STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL56307.1Uncharacterized membrane protein. (228 aa)    
Predicted Functional Partners:
SFL56333.1
Uncharacterized membrane protein.
 
    0.988
pcp
Pyroglutamyl-peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
 
     0.935
SFL56392.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.612
SFL56485.1
Alanine or glycine:cation symporter, AGCS family.
   
    0.601
SFL52082.1
Citrate synthase.
   
    0.519
SFL56272.1
D-glucuronate isomerase.
       0.451
SFL57907.1
Carbon starvation protein CstA.
   
    0.418
SFL56244.1
L-iditol 2-dehydrogenase.
       0.409
Your Current Organism:
Halanaerobium salsuginis
NCBI taxonomy Id: 29563
Other names: ATCC 51327, H. salsuginis, Haloanaerobium salsuginis, Haloanaerobium salsugo, strain VS-752
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.