Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL78106.1 | SFL78131.1 | SAMN02983006_02007 | SAMN02983006_02008 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motor switch protein FliG. | 0.999 |
SFL78106.1 | SFL78154.1 | SAMN02983006_02007 | SAMN02983006_02009 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar assembly protein FliH. | 0.988 |
SFL78106.1 | SFL78181.1 | SAMN02983006_02007 | SAMN02983006_02010 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Type III secretion system ATPase, FliI/YscN. | 0.997 |
SFL78106.1 | SFL78203.1 | SAMN02983006_02007 | SAMN02983006_02011 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar FliJ protein. | 0.969 |
SFL78106.1 | SFL78228.1 | SAMN02983006_02007 | SAMN02983006_02012 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.977 |
SFL78106.1 | SFL78280.1 | SAMN02983006_02007 | SAMN02983006_02014 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal-body rod modification protein FlgD. | 0.995 |
SFL78106.1 | SFL78442.1 | SAMN02983006_02007 | SAMN02983006_02020 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.972 |
SFL78106.1 | SFL78496.1 | SAMN02983006_02007 | SAMN02983006_02022 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motor switch protein FliN/FliY. | 0.999 |
SFL78106.1 | flhA | SAMN02983006_02007 | SAMN02983006_02028 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.987 |
SFL78106.1 | fliE | SAMN02983006_02007 | SAMN02983006_02006 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-basal body complex protein FliE. | 0.996 |
SFL78131.1 | SFL78106.1 | SAMN02983006_02008 | SAMN02983006_02007 | Flagellar motor switch protein FliG. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.999 |
SFL78131.1 | SFL78154.1 | SAMN02983006_02008 | SAMN02983006_02009 | Flagellar motor switch protein FliG. | Flagellar assembly protein FliH. | 0.995 |
SFL78131.1 | SFL78181.1 | SAMN02983006_02008 | SAMN02983006_02010 | Flagellar motor switch protein FliG. | Type III secretion system ATPase, FliI/YscN. | 0.998 |
SFL78131.1 | SFL78203.1 | SAMN02983006_02008 | SAMN02983006_02011 | Flagellar motor switch protein FliG. | Flagellar FliJ protein. | 0.966 |
SFL78131.1 | SFL78228.1 | SAMN02983006_02008 | SAMN02983006_02012 | Flagellar motor switch protein FliG. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.979 |
SFL78131.1 | SFL78280.1 | SAMN02983006_02008 | SAMN02983006_02014 | Flagellar motor switch protein FliG. | Flagellar basal-body rod modification protein FlgD. | 0.985 |
SFL78131.1 | SFL78442.1 | SAMN02983006_02008 | SAMN02983006_02020 | Flagellar motor switch protein FliG. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.963 |
SFL78131.1 | SFL78496.1 | SAMN02983006_02008 | SAMN02983006_02022 | Flagellar motor switch protein FliG. | Flagellar motor switch protein FliN/FliY. | 0.999 |
SFL78131.1 | flhA | SAMN02983006_02008 | SAMN02983006_02028 | Flagellar motor switch protein FliG. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.987 |
SFL78131.1 | fliE | SAMN02983006_02008 | SAMN02983006_02006 | Flagellar motor switch protein FliG. | Flagellar hook-basal body complex protein FliE. | 0.994 |
page 1 of 6