Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL91657.1 | SHL91731.1 | SAMN05878437_0248 | SAMN05878437_0252 | MHYT domain-containing protein, NO-binding membrane sensor. | TorA specific chaperone. | 0.466 |
SHL91657.1 | SHL96681.1 | SAMN05878437_0248 | SAMN05878437_0528 | MHYT domain-containing protein, NO-binding membrane sensor. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.999 |
SHL91657.1 | SHM05850.1 | SAMN05878437_0248 | SAMN05878437_1010 | MHYT domain-containing protein, NO-binding membrane sensor. | Tetrathionate reductase alpha subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.482 |
SHL91694.1 | SHL91711.1 | SAMN05878437_0250 | SAMN05878437_0251 | Hypothetical protein. | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.477 |
SHL91694.1 | SHL91731.1 | SAMN05878437_0250 | SAMN05878437_0252 | Hypothetical protein. | TorA specific chaperone. | 0.477 |
SHL91694.1 | SHL91751.1 | SAMN05878437_0250 | SAMN05878437_0253 | Hypothetical protein. | Cytochrome c, mono-and diheme variants. | 0.477 |
SHL91711.1 | SHL91694.1 | SAMN05878437_0251 | SAMN05878437_0250 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.477 |
SHL91711.1 | SHL91731.1 | SAMN05878437_0251 | SAMN05878437_0252 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | TorA specific chaperone. | 0.949 |
SHL91711.1 | SHL91751.1 | SAMN05878437_0251 | SAMN05878437_0253 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c, mono-and diheme variants. | 0.885 |
SHL91711.1 | SHM05520.1 | SAMN05878437_0251 | SAMN05878437_0994 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 2,4-dienoyl-CoA reductase. | 0.444 |
SHL91711.1 | SHM05850.1 | SAMN05878437_0251 | SAMN05878437_1010 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Tetrathionate reductase alpha subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.664 |
SHL91711.1 | moaC | SAMN05878437_0251 | SAMN05878437_0478 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.828 |
SHL91731.1 | SHL91657.1 | SAMN05878437_0252 | SAMN05878437_0248 | TorA specific chaperone. | MHYT domain-containing protein, NO-binding membrane sensor. | 0.466 |
SHL91731.1 | SHL91694.1 | SAMN05878437_0252 | SAMN05878437_0250 | TorA specific chaperone. | Hypothetical protein. | 0.477 |
SHL91731.1 | SHL91711.1 | SAMN05878437_0252 | SAMN05878437_0251 | TorA specific chaperone. | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.949 |
SHL91731.1 | SHL91751.1 | SAMN05878437_0252 | SAMN05878437_0253 | TorA specific chaperone. | Cytochrome c, mono-and diheme variants. | 0.927 |
SHL91731.1 | SHL96681.1 | SAMN05878437_0252 | SAMN05878437_0528 | TorA specific chaperone. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.465 |
SHL91731.1 | SHM05520.1 | SAMN05878437_0252 | SAMN05878437_0994 | TorA specific chaperone. | 2,4-dienoyl-CoA reductase. | 0.609 |
SHL91731.1 | SHM05850.1 | SAMN05878437_0252 | SAMN05878437_1010 | TorA specific chaperone. | Tetrathionate reductase alpha subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.964 |
SHL91731.1 | moaC | SAMN05878437_0252 | SAMN05878437_0478 | TorA specific chaperone. | Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.504 |
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