STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM00055.1Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). (535 aa)    
Predicted Functional Partners:
SHM32536.1
Copper resistance protein B.
 
  
 0.882
SHM32558.1
Copper-resistance protein, CopA family.
 
  
0.798
SHM32625.1
Uncharacterized copper-binding protein, cupredoxin-like subfamily.
  
 
 0.756
SHL91657.1
MHYT domain-containing protein, NO-binding membrane sensor.
 
 
 0.720
SHM33071.1
PAS domain S-box-containing protein.
  
 
 0.711
SHM09884.1
PAS domain S-box-containing protein.
  
 
 0.692
SHM34948.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
 
  0.687
SHM01001.1
Cu+-exporting ATPase.
 
  
 0.667
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.656
tatB
Sec-independent protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
  
 
 
 0.602
Your Current Organism:
Halomonas subglaciescola
NCBI taxonomy Id: 29571
Other names: ACAM 12, ATCC 43668, CIP 104042, DSM 4683, H. subglaciescola, IFO 14766, JCM 21045, LMG 8824, LMG:8824, NBRC 14766, UQM 2926
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