Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL96492.1 | SHM01418.1 | SAMN05878437_0517 | SAMN05878437_0785 | SEC-C motif-containing protein. | Phosphatidate phosphatase APP1. | 0.401 |
SHM01418.1 | SHL96492.1 | SAMN05878437_0785 | SAMN05878437_0517 | Phosphatidate phosphatase APP1. | SEC-C motif-containing protein. | 0.401 |
SHM01418.1 | cysD | SAMN05878437_0785 | SAMN05878437_0787 | Phosphatidate phosphatase APP1. | Sulfate adenylyltransferase subunit 2. | 0.471 |
SHM01418.1 | cysN | SAMN05878437_0785 | SAMN05878437_0786 | Phosphatidate phosphatase APP1. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.540 |
cysD | SHM01418.1 | SAMN05878437_0787 | SAMN05878437_0785 | Sulfate adenylyltransferase subunit 2. | Phosphatidate phosphatase APP1. | 0.471 |
cysD | cysN | SAMN05878437_0787 | SAMN05878437_0786 | Sulfate adenylyltransferase subunit 2. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
cysN | SHM01418.1 | SAMN05878437_0786 | SAMN05878437_0785 | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Phosphatidate phosphatase APP1. | 0.540 |
cysN | cysD | SAMN05878437_0786 | SAMN05878437_0787 | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Sulfate adenylyltransferase subunit 2. | 0.999 |