Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM11454.1 | SHM11474.1 | SAMN05878437_1287 | SAMN05878437_1288 | Protein of unknown function. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.736 |
SHM11454.1 | SHM11487.1 | SAMN05878437_1287 | SAMN05878437_1289 | Protein of unknown function. | Hypothetical protein. | 0.682 |
SHM11454.1 | SHM11515.1 | SAMN05878437_1287 | SAMN05878437_1290 | Protein of unknown function. | Hypothetical protein. | 0.431 |
SHM11474.1 | SHM11454.1 | SAMN05878437_1288 | SAMN05878437_1287 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | Protein of unknown function. | 0.736 |
SHM11474.1 | SHM11487.1 | SAMN05878437_1288 | SAMN05878437_1289 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | Hypothetical protein. | 0.773 |
SHM11474.1 | SHM11515.1 | SAMN05878437_1288 | SAMN05878437_1290 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | Hypothetical protein. | 0.480 |
SHM11487.1 | SHM11454.1 | SAMN05878437_1289 | SAMN05878437_1287 | Hypothetical protein. | Protein of unknown function. | 0.682 |
SHM11487.1 | SHM11474.1 | SAMN05878437_1289 | SAMN05878437_1288 | Hypothetical protein. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.773 |
SHM11487.1 | SHM11515.1 | SAMN05878437_1289 | SAMN05878437_1290 | Hypothetical protein. | Hypothetical protein. | 0.480 |
SHM11515.1 | SHM11454.1 | SAMN05878437_1290 | SAMN05878437_1287 | Hypothetical protein. | Protein of unknown function. | 0.431 |
SHM11515.1 | SHM11474.1 | SAMN05878437_1290 | SAMN05878437_1288 | Hypothetical protein. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.480 |
SHM11515.1 | SHM11487.1 | SAMN05878437_1290 | SAMN05878437_1289 | Hypothetical protein. | Hypothetical protein. | 0.480 |
SHM11515.1 | SHM11523.1 | SAMN05878437_1290 | SAMN05878437_1291 | Hypothetical protein. | Hypothetical protein. | 0.543 |
SHM11523.1 | SHM11515.1 | SAMN05878437_1291 | SAMN05878437_1290 | Hypothetical protein. | Hypothetical protein. | 0.543 |