STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM16150.1PAS domain S-box-containing protein. (189 aa)    
Predicted Functional Partners:
SHL91657.1
MHYT domain-containing protein, NO-binding membrane sensor.
  
 0.999
SHL96681.1
Two-component system, NarL family, sensor histidine kinase BarA.
 0.999
SHM02064.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.999
SHM09884.1
PAS domain S-box-containing protein.
 0.999
SHM09901.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 0.999
SHM18486.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.999
SHM28114.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.999
SHM28574.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.999
SHM33071.1
PAS domain S-box-containing protein.
  
 0.999
SHL91664.1
Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein.
  
 0.998
Your Current Organism:
Halomonas subglaciescola
NCBI taxonomy Id: 29571
Other names: ACAM 12, ATCC 43668, CIP 104042, DSM 4683, H. subglaciescola, IFO 14766, JCM 21045, LMG 8824, LMG:8824, NBRC 14766, UQM 2926
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