STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM18621.1Cytochrome c oxidase cbb3-type subunit 1. (538 aa)    
Predicted Functional Partners:
SHM18640.1
Cytochrome c oxidase cbb3-type subunit 2.
 0.999
SHM33377.1
Cytochrome c oxidase cbb3-type subunit 2.
 0.999
SHM33339.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.998
SHM18662.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
  0.972
SHM33315.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.958
SHM33358.1
Cytochrome c oxidase cbb3-type subunit 4.
  
 
 0.940
SHM21647.1
Hypothetical protein.
  
 
 0.937
SHM18684.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase.
 
     0.889
SHM03210.1
Cytochrome c553.
  
 0.751
SHM21983.1
Cytochrome c553.
  
 0.751
Your Current Organism:
Halomonas subglaciescola
NCBI taxonomy Id: 29571
Other names: ACAM 12, ATCC 43668, CIP 104042, DSM 4683, H. subglaciescola, IFO 14766, JCM 21045, LMG 8824, LMG:8824, NBRC 14766, UQM 2926
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