Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM11546.1 | SHM19183.1 | SAMN05878437_1292 | SAMN05878437_1699 | CDP-4-dehydro-6-deoxyglucose reductase. | Dihydropyrimidinase. | 0.914 |
SHM11546.1 | SHM26738.1 | SAMN05878437_1292 | SAMN05878437_2079 | CDP-4-dehydro-6-deoxyglucose reductase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.938 |
SHM11546.1 | SHM28229.1 | SAMN05878437_1292 | SAMN05878437_2155 | CDP-4-dehydro-6-deoxyglucose reductase. | Nucleobase:cation symporter-2, NCS2 family. | 0.591 |
SHM11546.1 | carA | SAMN05878437_1292 | SAMN05878437_1506 | CDP-4-dehydro-6-deoxyglucose reductase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.945 |
SHM11546.1 | carB | SAMN05878437_1292 | SAMN05878437_1505 | CDP-4-dehydro-6-deoxyglucose reductase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.955 |
SHM11546.1 | purL | SAMN05878437_1292 | SAMN05878437_2364 | CDP-4-dehydro-6-deoxyglucose reductase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.715 |
SHM11546.1 | pyrD | SAMN05878437_1292 | SAMN05878437_2729 | CDP-4-dehydro-6-deoxyglucose reductase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.997 |
SHM11546.1 | pyrE | SAMN05878437_1292 | SAMN05878437_1911 | CDP-4-dehydro-6-deoxyglucose reductase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.949 |
SHM11546.1 | pyrF | SAMN05878437_1292 | SAMN05878437_2881 | CDP-4-dehydro-6-deoxyglucose reductase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.944 |
SHM19183.1 | SHM11546.1 | SAMN05878437_1699 | SAMN05878437_1292 | Dihydropyrimidinase. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.914 |
SHM19183.1 | SHM26738.1 | SAMN05878437_1699 | SAMN05878437_2079 | Dihydropyrimidinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.999 |
SHM19183.1 | SHM28229.1 | SAMN05878437_1699 | SAMN05878437_2155 | Dihydropyrimidinase. | Nucleobase:cation symporter-2, NCS2 family. | 0.813 |
SHM19183.1 | carA | SAMN05878437_1699 | SAMN05878437_1506 | Dihydropyrimidinase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.980 |
SHM19183.1 | carB | SAMN05878437_1699 | SAMN05878437_1505 | Dihydropyrimidinase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.983 |
SHM19183.1 | guaA | SAMN05878437_1699 | SAMN05878437_2575 | Dihydropyrimidinase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.475 |
SHM19183.1 | purL | SAMN05878437_1699 | SAMN05878437_2364 | Dihydropyrimidinase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.556 |
SHM19183.1 | pyrD | SAMN05878437_1699 | SAMN05878437_2729 | Dihydropyrimidinase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.983 |
SHM19183.1 | pyrE | SAMN05878437_1699 | SAMN05878437_1911 | Dihydropyrimidinase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.952 |
SHM19183.1 | pyrF | SAMN05878437_1699 | SAMN05878437_2881 | Dihydropyrimidinase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.937 |
SHM26738.1 | SHM11546.1 | SAMN05878437_2079 | SAMN05878437_1292 | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.938 |
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