Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL87543.1 | SHM18566.1 | SAMN05878437_0016 | SAMN05878437_1668 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase. | 0.519 |
SHL87543.1 | SHM26501.1 | SAMN05878437_0016 | SAMN05878437_2065 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0149 family. | 0.471 |
SHL87543.1 | SHM30078.1 | SAMN05878437_0016 | SAMN05878437_2246 | Hypothetical protein. | Hypothetical protein. | 0.766 |
SHL87543.1 | SHM32753.1 | SAMN05878437_0016 | SAMN05878437_2388 | Hypothetical protein. | Outer membrane protein assembly factor BamC. | 0.584 |
SHL87543.1 | zipA | SAMN05878437_0016 | SAMN05878437_2560 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.705 |
SHM05350.1 | SHM18566.1 | SAMN05878437_0983 | SAMN05878437_1668 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase. | 0.775 |
SHM05350.1 | SHM26501.1 | SAMN05878437_0983 | SAMN05878437_2065 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0149 family. | 0.750 |
SHM05350.1 | SHM30078.1 | SAMN05878437_0983 | SAMN05878437_2246 | Hypothetical protein. | Hypothetical protein. | 0.697 |
SHM05350.1 | SHM32118.1 | SAMN05878437_0983 | SAMN05878437_2352 | Hypothetical protein. | Sporulation related domain-containing protein. | 0.609 |
SHM05350.1 | SHM32753.1 | SAMN05878437_0983 | SAMN05878437_2388 | Hypothetical protein. | Outer membrane protein assembly factor BamC. | 0.709 |
SHM05350.1 | zipA | SAMN05878437_0983 | SAMN05878437_2560 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.725 |
SHM18566.1 | SHL87543.1 | SAMN05878437_1668 | SAMN05878437_0016 | dTDP-4-dehydrorhamnose reductase. | Hypothetical protein. | 0.519 |
SHM18566.1 | SHM05350.1 | SAMN05878437_1668 | SAMN05878437_0983 | dTDP-4-dehydrorhamnose reductase. | Hypothetical protein. | 0.775 |
SHM18566.1 | SHM26501.1 | SAMN05878437_1668 | SAMN05878437_2065 | dTDP-4-dehydrorhamnose reductase. | Hypothetical protein; Belongs to the UPF0149 family. | 0.760 |
SHM18566.1 | SHM30078.1 | SAMN05878437_1668 | SAMN05878437_2246 | dTDP-4-dehydrorhamnose reductase. | Hypothetical protein. | 0.710 |
SHM18566.1 | SHM32118.1 | SAMN05878437_1668 | SAMN05878437_2352 | dTDP-4-dehydrorhamnose reductase. | Sporulation related domain-containing protein. | 0.405 |
SHM18566.1 | SHM32753.1 | SAMN05878437_1668 | SAMN05878437_2388 | dTDP-4-dehydrorhamnose reductase. | Outer membrane protein assembly factor BamC. | 0.743 |
SHM18566.1 | zipA | SAMN05878437_1668 | SAMN05878437_2560 | dTDP-4-dehydrorhamnose reductase. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.711 |
SHM26501.1 | SHL87543.1 | SAMN05878437_2065 | SAMN05878437_0016 | Hypothetical protein; Belongs to the UPF0149 family. | Hypothetical protein. | 0.471 |
SHM26501.1 | SHM05350.1 | SAMN05878437_2065 | SAMN05878437_0983 | Hypothetical protein; Belongs to the UPF0149 family. | Hypothetical protein. | 0.750 |
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