Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM01016.1 | SHM39900.1 | SAMN05878437_0765 | SAMN05878437_2755 | Hypothetical protein. | Hypothetical protein. | 0.535 |
SHM01016.1 | SHM39934.1 | SAMN05878437_0765 | SAMN05878437_2757 | Hypothetical protein. | Hypothetical protein. | 0.576 |
SHM01016.1 | SHM39954.1 | SAMN05878437_0765 | SAMN05878437_2758 | Hypothetical protein. | PelD GGDEF domain-containing protein. | 0.596 |
SHM01016.1 | SHM39986.1 | SAMN05878437_0765 | SAMN05878437_2759 | Hypothetical protein. | Hypothetical protein. | 0.976 |
SHM01016.1 | SHM40005.1 | SAMN05878437_0765 | SAMN05878437_2760 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.486 |
SHM01016.1 | SHM40045.1 | SAMN05878437_0765 | SAMN05878437_2762 | Hypothetical protein. | Uncharacterized membrane protein. | 0.466 |
SHM01016.1 | alaS | SAMN05878437_0765 | SAMN05878437_2540 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.564 |
SHM01016.1 | dnaK | SAMN05878437_0765 | SAMN05878437_1513 | Hypothetical protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.956 |
SHM01016.1 | htpG | SAMN05878437_0765 | SAMN05878437_0659 | Hypothetical protein. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.651 |
SHM21168.1 | SHM39986.1 | SAMN05878437_1795 | SAMN05878437_2759 | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | Hypothetical protein. | 0.892 |
SHM39900.1 | SHM01016.1 | SAMN05878437_2755 | SAMN05878437_0765 | Hypothetical protein. | Hypothetical protein. | 0.535 |
SHM39900.1 | SHM39934.1 | SAMN05878437_2755 | SAMN05878437_2757 | Hypothetical protein. | Hypothetical protein. | 0.935 |
SHM39900.1 | SHM39954.1 | SAMN05878437_2755 | SAMN05878437_2758 | Hypothetical protein. | PelD GGDEF domain-containing protein. | 0.936 |
SHM39900.1 | SHM39986.1 | SAMN05878437_2755 | SAMN05878437_2759 | Hypothetical protein. | Hypothetical protein. | 0.935 |
SHM39900.1 | SHM40005.1 | SAMN05878437_2755 | SAMN05878437_2760 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.936 |
SHM39900.1 | SHM40045.1 | SAMN05878437_2755 | SAMN05878437_2762 | Hypothetical protein. | Uncharacterized membrane protein. | 0.891 |
SHM39934.1 | SHM01016.1 | SAMN05878437_2757 | SAMN05878437_0765 | Hypothetical protein. | Hypothetical protein. | 0.576 |
SHM39934.1 | SHM39900.1 | SAMN05878437_2757 | SAMN05878437_2755 | Hypothetical protein. | Hypothetical protein. | 0.935 |
SHM39934.1 | SHM39954.1 | SAMN05878437_2757 | SAMN05878437_2758 | Hypothetical protein. | PelD GGDEF domain-containing protein. | 0.977 |
SHM39934.1 | SHM39986.1 | SAMN05878437_2757 | SAMN05878437_2759 | Hypothetical protein. | Hypothetical protein. | 0.966 |
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