Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fieFDivalent metal cation transporter FieF; Member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (300 aa)    
Predicted Functional Partners:
ARQ76915.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.885
cadA
Cadmium-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.641
ARQ72909.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.585
ARQ73284.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.559
B6D87_03335
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.538
ARQ76357.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.511
ARQ73844.1
Zinc transporter ZntB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.493
ARQ74213.1
Cbb3-type cytochrome oxidase assembly protein CcoS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.488
ARQ73285.1
ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.400
Your Current Organism:
Pseudomonas fragi
NCBI taxonomy Id: 296
Other names: ATCC 4973, Bacterium fragi, CCUG 556, CFBP 4556, CIP 55.4, DSM 3456, HAMBI 28, IFO 3458, LMG 2191, LMG:2191, NBRC 3458, NCCB 69033, NCIB 8542, NCIB:8542, NCTC 10689, NRRL B-25, NRRL B-727, NRRL:B:25, P. fragi, Pseudomonas fragariae, VKM B-898, VKM:B:898
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