ARQ74585.1 protein (Pseudomonas fragi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARQ74585.1

Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)

Predicted Functional Partners:

ARQ74584.1

0.960

ARQ74586.1

0.960

ARQ76299.1

0.823

ARQ76304.1

0.820

ARQ76305.1

0.817

ARQ74583.1

0.813

ARQ73520.1

0.792

ssuC

0.778

ARQ72724.1

0.778

ARQ75638.1

0.751

Your Current Organism:

Pseudomonas fragi

NCBI taxonomy Id: 296
Other names: ATCC 4973, Bacterium fragi, CCUG 556, CFBP 4556, CIP 55.4, DSM 3456, HAMBI 28, IFO 3458, LMG 2191, LMG:2191, NBRC 3458, NCCB 69033, NCIB 8542, NCIB:8542, NCTC 10689, NRRL B-25, NRRL B-727, NRRL:B:25, P. fragi, Pseudomonas fragariae, VKM B-898, VKM:B:898

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARQ72724.1	ARQ74585.1	B6D87_00200	B6D87_10310	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
ARQ72724.1	ARQ75638.1	B6D87_00200	B6D87_16060	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alkanesulfonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
ARQ73520.1	ARQ74585.1	B6D87_04580	B6D87_10310	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
ARQ73520.1	ARQ75638.1	B6D87_04580	B6D87_16060	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alkanesulfonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
ARQ74583.1	ARQ74584.1	B6D87_10300	B6D87_10305	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
ARQ74583.1	ARQ74585.1	B6D87_10300	B6D87_10310	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
ARQ74583.1	ARQ74586.1	B6D87_10300	B6D87_10315	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
ARQ74584.1	ARQ74583.1	B6D87_10305	B6D87_10300	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
ARQ74584.1	ARQ74585.1	B6D87_10305	B6D87_10310	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
ARQ74584.1	ARQ74586.1	B6D87_10305	B6D87_10315	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
ARQ74584.1	ARQ76304.1	B6D87_10305	B6D87_19750	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
ARQ74585.1	ARQ72724.1	B6D87_10310	B6D87_00200	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
ARQ74585.1	ARQ73520.1	B6D87_10310	B6D87_04580	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
ARQ74585.1	ARQ74583.1	B6D87_10310	B6D87_10300	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
ARQ74585.1	ARQ74584.1	B6D87_10310	B6D87_10305	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
ARQ74585.1	ARQ74586.1	B6D87_10310	B6D87_10315	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
ARQ74585.1	ARQ75638.1	B6D87_10310	B6D87_16060	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alkanesulfonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ARQ74585.1	ARQ76299.1	B6D87_10310	B6D87_19725	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
ARQ74585.1	ARQ76304.1	B6D87_10310	B6D87_19750	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
ARQ74585.1	ARQ76305.1	B6D87_10310	B6D87_19755	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Textmining

Fusion

Experiments

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About