Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARQ73273.1 | ARQ76100.1 | B6D87_03190 | B6D87_18570 | PhoH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | 0.453 |
| ARQ76097.1 | ARQ76100.1 | B6D87_18555 | B6D87_18570 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | 0.651 |
| ARQ76097.1 | ARQ76101.1 | B6D87_18555 | B6D87_18575 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.672 |
| ARQ76097.1 | lptA | B6D87_18555 | B6D87_18545 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.559 |
| ARQ76097.1 | ptsN | B6D87_18555 | B6D87_18565 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
| ARQ76097.1 | ptsP-2 | B6D87_18555 | B6D87_04935 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
| ARQ76097.1 | raiA | B6D87_18555 | B6D87_18560 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.732 |
| ARQ76100.1 | ARQ73273.1 | B6D87_18570 | B6D87_03190 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | PhoH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
| ARQ76100.1 | ARQ76097.1 | B6D87_18570 | B6D87_18555 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.651 |
| ARQ76100.1 | ARQ76101.1 | B6D87_18570 | B6D87_18575 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| ARQ76100.1 | ARQ76112.1 | B6D87_18570 | B6D87_18630 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Ribonuclease E/G; Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
| ARQ76100.1 | glmM | B6D87_18570 | B6D87_19355 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.591 |
| ARQ76100.1 | lptA | B6D87_18570 | B6D87_18545 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.462 |
| ARQ76100.1 | ptsN | B6D87_18570 | B6D87_18565 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
| ARQ76100.1 | ptsP-2 | B6D87_18570 | B6D87_04935 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.521 |
| ARQ76100.1 | raiA | B6D87_18570 | B6D87_18560 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.890 |
| ARQ76100.1 | rne | B6D87_18570 | B6D87_06515 | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.652 |
| ARQ76101.1 | ARQ76097.1 | B6D87_18575 | B6D87_18555 | Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.672 |
| ARQ76101.1 | ARQ76100.1 | B6D87_18575 | B6D87_18570 | Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNase adaptor protein RapZ; Displays ATPase and GTPase activities. | 0.833 |
| ARQ76101.1 | lptA | B6D87_18575 | B6D87_18545 | Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.487 |
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