STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ76318.1HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
ARQ76321.1
Trehalose phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.853
ARQ76322.1
Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.843
ARQ76319.1
Citrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.831
ARQ76320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.828
ARQ76323.1
Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.677
ARQ76316.1
Tellurium resistance protein TerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.670
ARQ76317.1
Stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.637
ARQ76314.1
Tellurium resistance protein TerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.605
hisF
Imidazole glycerol phosphate synthase cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
  
 0.604
ARQ76315.1
Tellurite resistance TerB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.569
Your Current Organism:
Pseudomonas fragi
NCBI taxonomy Id: 296
Other names: ATCC 4973, Bacterium fragi, CCUG 556, CFBP 4556, CIP 55.4, DSM 3456, HAMBI 28, IFO 3458, LMG 2191, LMG:2191, NBRC 3458, NCCB 69033, NCIB 8542, NCIB:8542, NCTC 10689, NRRL B-25, NRRL B-727, NRRL:B:25, P. fragi, Pseudomonas fragariae, VKM B-898, VKM:B:898
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.