STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ76695.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
ARQ76697.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
ARQ76696.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.941
ARQ76698.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.939
ARQ75790.1
Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.858
ARQ75791.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.840
ARQ74417.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.835
ARQ74416.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.816
nikD
Nickel import ATP-binding protein NikD; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
 
    
0.790
ARQ74541.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.787
ARQ74418.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
    0.776
Your Current Organism:
Pseudomonas fragi
NCBI taxonomy Id: 296
Other names: ATCC 4973, Bacterium fragi, CCUG 556, CFBP 4556, CIP 55.4, DSM 3456, HAMBI 28, IFO 3458, LMG 2191, LMG:2191, NBRC 3458, NCCB 69033, NCIB 8542, NCIB:8542, NCTC 10689, NRRL B-25, NRRL B-727, NRRL:B:25, P. fragi, Pseudomonas fragariae, VKM B-898, VKM:B:898
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.