Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KYG76648.1 | KYG81801.1 | AWN68_06370 | AWN68_16370 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.402 |
| KYG76648.1 | KYG83547.1 | AWN68_06370 | AWN68_01725 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.486 |
| KYG76648.1 | KYG83548.1 | AWN68_06370 | AWN68_01730 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ArsC family. | 0.432 |
| KYG80782.1 | KYG81801.1 | AWN68_16880 | AWN68_16370 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.581 |
| KYG80782.1 | KYG83547.1 | AWN68_16880 | AWN68_01725 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| KYG80782.1 | polA | AWN68_16880 | AWN68_02055 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.983 |
| KYG80782.1 | rpoA | AWN68_16880 | AWN68_05530 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
| KYG81801.1 | KYG76648.1 | AWN68_16370 | AWN68_06370 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
| KYG81801.1 | KYG80782.1 | AWN68_16370 | AWN68_16880 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. | 0.581 |
| KYG81801.1 | KYG83545.1 | AWN68_16370 | AWN68_01715 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
| KYG81801.1 | KYG83547.1 | AWN68_16370 | AWN68_01725 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.888 |
| KYG81801.1 | KYG83548.1 | AWN68_16370 | AWN68_01730 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ArsC family. | 0.818 |
| KYG81801.1 | polA | AWN68_16370 | AWN68_02055 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.562 |
| KYG81801.1 | rpoA | AWN68_16370 | AWN68_05530 | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
| KYG83544.1 | KYG83545.1 | AWN68_01705 | AWN68_01715 | DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
| KYG83544.1 | KYG83546.1 | AWN68_01705 | AWN68_01720 | DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prolyl 4-hydroxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
| KYG83544.1 | KYG83547.1 | AWN68_01705 | AWN68_01725 | DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.673 |
| KYG83544.1 | KYG83900.1 | AWN68_01705 | AWN68_01710 | DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.686 |
| KYG83545.1 | KYG81801.1 | AWN68_01715 | AWN68_16370 | Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.548 |
| KYG83545.1 | KYG83544.1 | AWN68_01715 | AWN68_01705 | Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
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