STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_94G00180RING-type domain-containing protein. (871 aa)    
Predicted Functional Partners:
A0A0K9NXB7
E3 ubiquitin-protein ligase listerin.
    
 
 0.584
ZOSMA_38G00420
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.555
A0A0K9PKV7
Uncharacterized protein.
    
 
 0.524
ZOSMA_54G00990
CUE domain-containing protein.
    
 
 0.514
ZOSMA_87G00300
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.508
ZOSMA_72G00810
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.508
A0A0K9PM94
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.508
ZOSMA_89G01020
Putative Activating signal cointegrator.
    
 
 0.500
A0A0K9PM08
Helicase C-terminal domain-containing protein.
    
 
 0.474
A0A0K9PNS5
Activating signal cointegrator 1 complex subunit.
    
 
 0.474
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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