STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_93G00900Uncharacterized protein. (353 aa)    
Predicted Functional Partners:
A0A0K9Q2G8
Tower domain-containing protein.
   
 0.887
ZOSMA_31G01060
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.880
A0A0K9PTF3
DNA repair and recombination protein radA.
    
 0.862
A0A0K9Q400
Uncharacterized protein; Belongs to the RecA family.
   
 0.790
A0A0K9Q4E5
Putative DNA repair and recombination protein radA.
   
 0.790
A0A0K9PG93
DNA repair protein XRCC2-like protein.
   
 0.761
A0A0K9PTY7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.744
ZOSMA_75G00760
ERCC4 domain-containing protein.
   
 0.734
ZOSMA_42G00360
Flap endonuclease 1.
  
 0.703
A0A0K9PF59
Flap endonuclease 1.
  
 0.703
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.