STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_9G01700ATP-dependent DNA helicase; Belongs to the helicase family. (273 aa)    
Predicted Functional Partners:
A0A0K9PTY7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.627
A0A0K9P3A2
ASF1 like histone chaperone.
   
 
 0.566
A0A0K9PW06
Uncharacterized protein.
 
     0.537
ZOSMA_15G01010
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 
 0.510
ZOSMA_37G01480
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.509
ZOSMA_5G02610
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.473
A0A0K9P4W5
Putative DNA replication helicase dna2.
    
 
 0.467
ZOSMA_57G00270
Origin recognition complex 5 subunit.
    
 
 0.466
ZOSMA_42G00570
DNA repair protein RAD50.
   
 
 0.444
ZOSMA_31G01060
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.439
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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