STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_8G00300Putative GPI-anchored protein. (195 aa)    
Predicted Functional Partners:
A0A0K9PSK3
Uncharacterized protein.
   
    0.529
ZOSMA_45G00510
Zinc finger CCCH domain-containing protein.
      
 0.449
ZOSMA_99G00370
Seed maturation protein PM36.
      
 0.424
ZOSMA_68G00430
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
      
 0.424
ZOSMA_43G00080
NAD-dependent aldehyde dehydrogenase.
      
 0.422
ZOSMA_81G00210
Uncharacterized protein.
      
 0.420
ZOSMA_18G00070
Pollen-specific protein SF3.
      
 0.420
A0A0K9P541
Putative Translocation protein sec62.
      
 0.416
A0A0K9Q4A7
Putative Translocation protein sec62.
      
 0.416
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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