ZOSMA_97G00640 protein (Zostera marina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZOSMA_97G00640

Uncharacterized protein. (71 aa)

Predicted Functional Partners:

ZOSMA_46G00450

0.977

ZOSMA_52G01110

0.969

A0A0K9P4X7

0.968

ZOSMA_10G01480

0.962

A0A0K9P1G5

0.959

ZOSMA_68G00090

0.958

ZOSMA_44G00480

0.958

ZOSMA_4G01140

0.957

A0A0K9PWT6

0.957

ZOSMA_53G00200

0.955

Your Current Organism:

Zostera marina

NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0K9P1G5	A0A0K9P4X7	A0A0K9P1G5	A0A0K9P4X7	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 12 kDa subunit.	0.999
A0A0K9P1G5	A0A0K9PWT6	A0A0K9P1G5	A0A0K9PWT6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	F1F0-ATPase inhibitor protein.	0.957
A0A0K9P1G5	ZOSMA_10G01480	A0A0K9P1G5	A0A0K9Q3W7	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.962
A0A0K9P1G5	ZOSMA_44G00480	A0A0K9P1G5	A0A0K9P103	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.	0.999
A0A0K9P1G5	ZOSMA_46G00450	A0A0K9P1G5	A0A0K9P2C4	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase 1 beta subcomplex subunit 9; Belongs to the complex I LYR family.	0.998
A0A0K9P1G5	ZOSMA_4G01140	A0A0K9P1G5	A0A0K9P0T7	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase.	0.958
A0A0K9P1G5	ZOSMA_52G01110	A0A0K9P1G5	A0A0K9NZS2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.999
A0A0K9P1G5	ZOSMA_53G00200	A0A0K9P1G5	A0A0K9NZ64	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-quinone oxidoreductase subunit B; Belongs to the complex I 20 kDa subunit family.	0.999
A0A0K9P1G5	ZOSMA_68G00090	A0A0K9P1G5	A0A0K9NS47	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.957
A0A0K9P1G5	ZOSMA_97G00640	A0A0K9P1G5	A0A0K9NJZ9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.959
A0A0K9P4X7	A0A0K9P1G5	A0A0K9P4X7	A0A0K9P1G5	NADH-ubiquinone oxidoreductase 12 kDa subunit.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A0K9P4X7	A0A0K9PWT6	A0A0K9P4X7	A0A0K9PWT6	NADH-ubiquinone oxidoreductase 12 kDa subunit.	F1F0-ATPase inhibitor protein.	0.948
A0A0K9P4X7	ZOSMA_10G01480	A0A0K9P4X7	A0A0K9Q3W7	NADH-ubiquinone oxidoreductase 12 kDa subunit.	Uncharacterized protein.	0.951
A0A0K9P4X7	ZOSMA_44G00480	A0A0K9P4X7	A0A0K9P103	NADH-ubiquinone oxidoreductase 12 kDa subunit.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.	0.999
A0A0K9P4X7	ZOSMA_46G00450	A0A0K9P4X7	A0A0K9P2C4	NADH-ubiquinone oxidoreductase 12 kDa subunit.	NADH dehydrogenase 1 beta subcomplex subunit 9; Belongs to the complex I LYR family.	0.998
A0A0K9P4X7	ZOSMA_4G01140	A0A0K9P4X7	A0A0K9P0T7	NADH-ubiquinone oxidoreductase 12 kDa subunit.	NADH dehydrogenase.	0.950
A0A0K9P4X7	ZOSMA_52G01110	A0A0K9P4X7	A0A0K9NZS2	NADH-ubiquinone oxidoreductase 12 kDa subunit.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.999
A0A0K9P4X7	ZOSMA_53G00200	A0A0K9P4X7	A0A0K9NZ64	NADH-ubiquinone oxidoreductase 12 kDa subunit.	NADH-quinone oxidoreductase subunit B; Belongs to the complex I 20 kDa subunit family.	0.999
A0A0K9P4X7	ZOSMA_68G00090	A0A0K9P4X7	A0A0K9NS47	NADH-ubiquinone oxidoreductase 12 kDa subunit.	Uncharacterized protein.	0.969
A0A0K9P4X7	ZOSMA_97G00640	A0A0K9P4X7	A0A0K9NJZ9	NADH-ubiquinone oxidoreductase 12 kDa subunit.	Uncharacterized protein.	0.968