STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_95G00110Leucine-rich repeat extensin-like protein 6. (370 aa)    
Predicted Functional Partners:
ZOSMA_19G00560
Plant intracellular Ras-group-related LRR protein 7.
  
 
  0.586
A0A0K9Q5E4
Uncharacterized protein.
  
 
  0.573
A0A0K9P3A2
ASF1 like histone chaperone.
    
 0.569
A0A0K9P1T3
LRRNT_2 domain-containing protein.
  
 
  0.565
A0A0K9PXJ8
Leucine rich repeat protein.
  
 
  0.562
ZOSMA_14G01820
Uncharacterized protein.
  
 
  0.552
A0A0K9PRQ8
Uncharacterized protein.
  
 
  0.548
A0A0K9PTF8
Leucine rich repeat protein.
  
 
  0.545
ZOSMA_56G00360
Uncharacterized protein.
    
  0.540
A0A0K9PF82
Uncharacterized protein.
  
 
  0.516
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.