STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_88G00590Putative Carboxymethylenebutenolidase. (272 aa)    
Predicted Functional Partners:
ZOSMA_68G00790
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 
 0.864
ZOSMA_76G00960
Alpha/beta-Hydrolases superfamily protein.
  
 
 0.841
ZOSMA_28G00830
Palmitoyl-protein thioesterase 1.
  
 
 0.841
ZOSMA_27G00240
RING finger protein.
     
 0.794
A0A0K9PWM0
Putative Armadillo repeat-containing protein.
     
 0.794
ZOSMA_24G00940
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.790
ZOSMA_9G00290
Beta-galactosidase, family GH2.
    
  0.750
ZOSMA_94G00040
Mannosylglycoprotein endo-beta-mannosidase, family GH2.
    
  0.750
A0A0K9P0D3
Diacylglycerol acyltransferase 2.
   
 
  0.743
ZOSMA_44G01160
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.
    
  0.722
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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