STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_86G00560S-acyltransferase; Belongs to the DHHC palmitoyltransferase family. (554 aa)    
Predicted Functional Partners:
A0A0K9Q0B2
ANK_REP_REGION domain-containing protein.
  
 
   0.541
A0A0K9P6L5
Ankyrin repeat-containing protein.
  
 
   0.528
ZOSMA_5G02850
Ankyrin repeat-containing protein.
  
 
   0.511
A0A0K9PVT9
Putative Ankyrin repeat-containing protein.
  
 
   0.510
A0A0K9PZM3
Putative Ankyrin repeat-containing protein.
  
 
   0.502
A0A0K9Q569
Putative Ankyrin repeat-containing protein.
  
 
   0.498
ZOSMA_24G00780
Putative E3 ubiquitin-protein ligase XBOS34.
  
 
   0.428
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.