STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_85G00630E3 ubiquitin protein ligase RIN2. (576 aa)    
Predicted Functional Partners:
A0A0K9PT09
PRKCSH domain-containing protein.
   
 0.955
ZOSMA_97G00600
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.929
ZOSMA_12G00730
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.929
ZOSMA_84G00140
Sel-1.
    
 0.895
A0A0K9P6V2
Binding protein.
    
 0.895
ZOSMA_29G00870
F-box protein.
    
 0.895
ZOSMA_28G00850
Putative UBX domain-containing protein.
    
 
 0.819
A0A0K9Q1X4
UBX domain-containing protein.
    
 
 0.819
A0A0K9PYW8
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.810
A0A0K9PS84
Serine/threonine-protein kinase/endoribonuclease IRE1b.
    
 
 0.768
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (24%) [HD]