STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_77G00810Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
A0A0K9PDL5
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.913
ZOSMA_44G00720
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.861
A0A0K9Q1Q4
Transcription factor bHLH64.
   
 0.833
A0A0K9Q4D9
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
     
 0.661
ZOSMA_72G00610
Protein transport protein Sec24-like protein.
   
 
 0.645
A0A0K9PTP0
Uncharacterized protein.
   
 
 0.645
ZOSMA_43G00010
Protein transport protein Sec24-like.
   
 0.617
ZOSMA_2G00680
Protein transport protein Sec24-like.
   
 0.617
ZOSMA_23G00520
zf-Sec23_Sec24 domain-containing protein.
   
 0.617
ZOSMA_9G01000
Putative Syntaxin; Belongs to the syntaxin family.
   
 
 0.567
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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