STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_78G00690DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1583 aa)    
Predicted Functional Partners:
ZOSMA_79G00370
Cytosine-specific methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
 
 
0.907
A0A0K9PCM7
Adenosylhomocysteinase.
     
 0.870
ZOSMA_85G01020
ACS-like aminotransferase.
     
 0.842
ZOSMA_58G00630
PWWP domain-containing protein.
    
  0.841
ZOSMA_2G00700
E3 ubiquitin-protein ligase ORTHRUS 1.
  
 
 0.589
ZOSMA_2G00710
E3 ubiquitin-protein ligase UHRF1.
  
 
 0.584
ZOSMA_11G00240
E3 ubiquitin-protein ligase UHRF1.
  
 
 0.558
A0A0K9PTY7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.483
ZOSMA_10G01650
YDG domain-containing protein.
  
 
 0.433
A0A0K9PSA6
Transducin/WD40 repeat-like superfamily protein.
      
 0.428
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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