STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_82G00270Methylesterase 17. (238 aa)    
Predicted Functional Partners:
ZOSMA_41G00880
Pheophorbide a oxygenase.
     
 0.865
A0A0K9PL54
Acetyl-CoA carboxylase.
   
 0.642
ZOSMA_81G00870
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C proteindomain containing protein-like protein.
   
  0.629
ZOSMA_42G01120
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.612
ZOSMA_42G01110
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.612
A0A0K9PPA5
Isovaleryl-CoA dehydrogenase.
   
 0.610
ZOSMA_89G01280
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
  0.608
ZOSMA_76G01030
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
  0.608
A0A0K9P0B3
Acyl-CoA oxidase.
   
  0.608
ZOSMA_19G00040
Uncharacterized protein.
   
  0.608
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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