STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_82G00910L-lactate dehydrogenase (Cytochrome). (368 aa)    
Predicted Functional Partners:
ZOSMA_8G01590
Serine--glyoxylate aminotransferase.
  
 0.944
ZOSMA_1G03130
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.896
A0A0K9PVT1
Isocitrate lyase.
 
 
 0.894
ZOSMA_91G00080
UDP-N-acetylmuramate dehydrogenase.
 
 0.892
A0A0K9P968
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.887
A0A0K9PBL9
Hydroxyphenylpyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.887
A0A0K9Q0G1
Alanine aminotransferase.
  
 
 0.884
ZOSMA_99G00420
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.881
ZOSMA_8G01320
Mevalonate kinase.
  
 
 0.880
ZOSMA_85G00040
Aminotransferase like protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.880
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.