STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_80G00560Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (596 aa)    
Predicted Functional Partners:
ZOSMA_58G00650
Isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
ZOSMA_42G00830
Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
ZOSMA_2G00660
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
A0A0K9PEM7
Putative leucine-rich repeat receptor-like serine/threonine-proteinkinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 0.999
ZOSMA_24G00290
Glutamine--tRNA ligase, Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
ZOSMA_22G00630
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.999
ZOSMA_22G00690
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
A0A0K9PV36
Proline--tRNA ligase.
  
 0.999
A0A0K9PVD6
Uncharacterized protein.
  
 0.999
A0A0K9Q477
Proline--tRNA ligase.
  
 0.999
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.