STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_76G00640Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
ZOSMA_29G00870
F-box protein.
      
 0.426
ZOSMA_1G02340
Putative diphthine synthase.
      
 0.426
ZOSMA_74G01130
Soul heme-binding family protein.
      
 0.424
ZOSMA_29G01410
TPR_REGION domain-containing protein.
      
 0.424
A0A0K9PME9
CCR4-NOT transcription complex subunit 10-B.
      
 0.424
ZOSMA_1G02460
S-adenosyl-L-methionine-dependent methyltransferases superfamilyprotein.
      
 0.424
A0A0K9PPH6
Urease accessory protein F.
      
 0.424
A0A0K9PQA3
Putative Kinase.
      
 0.424
A0A0K9Q203
Uncharacterized protein.
      
 0.424
A0A0K9PQI0
Uncharacterized protein.
      
 0.422
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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