STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_7G00300Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
A0A0K9PFC9
tRNA (Guanine-N1-)-methyltransferase.
   
 0.544
A0A0K9PRV1
TATA-box binding protein.
   
    0.533
ZOSMA_25G00260
DOMON domain-containing protein / dopamine beta-monooxygenaseN-terminal domain-containing protein.
      
 0.471
ZOSMA_97G00430
Uncharacterized protein.
   
 
 0.429
ZOSMA_77G00860
Violaxanthin de-epoxidase, chloroplastic; Belongs to the calycin superfamily. Lipocalin family.
   
    0.426
ZOSMA_8G01150
Squalene synthase.
   
   0.424
ZOSMA_16G00900
Phytoene synthase.
   
   0.424
ZOSMA_94G00170
30S ribosomal protein S1, chloroplastic.
  
    0.417
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.